rs32006703 SNP Detail

Summary

• ID
  rs32006703
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:126575799 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTTAAAAG CCGCTCTCTC
  CTTCTTCCGA TGTTCTTAAC GTCCCGGACA GAAGAGTAGG CTCCAGAAGC CAGGCGCAGC
  GGAGCTGCGG AGCCCGCTGC TGGAGACGTC AGCTCCTGCC CATCGGAAGG CCAGGTGTGC
  GTGAGCTGTG CCCAGGGGTG TCCCGCACCC CGGCGCCCTG CGGGCTCTAA CAGCTGGGAT
  Y
  GCCCGGGGGA ACTGGGCCCA GGGCTCAGGT GGAGCGGCTG ATGCCCGGAG CTGAAAGGTG
  AGACCACGCT GGTAAGGCTG GTACCAAGAC CTTGCCCCTC CAGACCTGGG CCGAGACGAC
  AAGGGGAGCC GCCAAGATGC CAGAGGAAAA TATCTTCCTG TTCGTGCCTA ACCTTATCGG
  TGAGTGCTGC CTGCGGCCCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46094058	mCV25212429	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
ss145877132	ENSMUSSNP5856132	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32006703					SNP	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:126575799 () rs orientation: forward

Symbol	Name	Function Class
Cdipt	CDP-diacylglycerol--inositol 3-phosphatidyltransferase	mRNA-UTR
Cdiptos	CDIP transferase, opposite strand	224 bp upstream
Cpgi19724	CpG island 19724	within coordinates
Gm73941	predicted gene, 73941	1589 bp downstream
Rr368439	regulatory region 368439	318 bp downstream
Rr655656	regulatory region 655656	850 bp distal
Rr655657	regulatory region 655657	within coordinates
Tssr2401	transcription start site region 2401	29 bp downstream
Tssr69141	transcription start site region 69141	1003 bp downstream
Tssr69142	transcription start site region 69142	330 bp downstream
Tssr69143	transcription start site region 69143	227 bp downstream
Tssr69144	transcription start site region 69144	205 bp downstream
Tssr69145	transcription start site region 69145	161 bp downstream
Tssr69146	transcription start site region 69146	83 bp downstream
Tssr69147	transcription start site region 69147	50 bp downstream
Tssr69148	transcription start site region 69148	8 bp downstream
Tssr74865	transcription start site region 74865	1211 bp upstream
Tssr74866	transcription start site region 74866	784 bp upstream
Tssr74867	transcription start site region 74867	780 bp upstream
Tssr74868	transcription start site region 74868	522 bp upstream
Tssr74869	transcription start site region 74869	496 bp upstream
Tssr74870	transcription start site region 74870	485 bp upstream