rs32006946 SNP Detail

Summary

• ID
  rs32006946
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:133632527 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTCTCCACGG TGTGACATGG TGGCACTTTA TTTGAAATTC TTTAAACAAT ATATATATAT
  AGAGAGATAT AGATATAGAT ATATGGCTGA CTAATAAATG TCAGTTCCTG ACCTAAAGAA
  AACTATATTT TTTTGCATAA TATTTCTATA TTTTCTCTCT TACTATGGAA ACTACAGAAC
  ACGCATACAC AGAAAAACCT GTTGACTTTG AAAAAGTAGA CACAAGCCCT CAGGAGTTAA
  CCTGTCAGGC ACCACAGAAT TGTTTGGGAG CAAGGATGGT AAAATGGCCT TCAAAACTTG
  K
  TATTGGCTTA TTTTTTAAAA ATAATCTGAG GTAATAAAAG AGTTGACAGA ATCCAATCTT
  CTAATGTACT TAAATATATA TAGTTGAACA ACAACACCTT GAGTGAGATA CCTTTCCCCC
  CAAAGAGGAA AGATTGCCGA AATGTGTAAG CTTTACAAAA TCCCAATCAA AGCCTTCTCC
  CTACTTCCTC TAATGATGGA TTATGCTGGA ATGGGTGTGG GATGGTGTTT GTCCCTACAC
  TCACCCTCCC CTGGGAGCGT GGGGGAAAGG TGGGGTGGGA GGAAGAACGC TAGAAGAAGA
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45095353	mCV23241303	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32006946					SNP	T	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:133632527 () rs orientation: forward

Symbol	Name	Function Class
Atp2b4	ATPase, Ca++ transporting, plasma membrane 4	within coordinates