rs32007084 SNP Detail

Summary

• ID
  rs32007084
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:48529504 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACCAGGCAG TACACCATTC
  TTAAAGAAAG GGATTTGGAA GGCAACAACT CAGAGAACAG AGATACACTG TTTCCTCAGT
  AACTTTGGGA GCCCGGGTTA ACAATCCTCT ATTACAACCA TGAAACTAAG GGCTCAGTGT
  GTATTTCTGC TGAATCTGCT ACTTAGCAGA CGATGATGCG AGGCAGAGGG AGGTCACATG
  K
  GGCTGGCACC TGAATTTTCA GTTCAGTATG GTGCCCTCAG GAGGTGCTGA TCCAAGGGTG
  GGGTTTCAGT GAACACTGCC AAGGACAGCA TTGAGCTAAC ATCTAAATGC TTCCAGGAGA
  TCTGTCAGGA ACAGCATTTG GAGGCCCAGT AGGTTAAAGG GCTGACATTT TAAAATGTTA
  TCTTACAAAG AAATCCAGTA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss46093961	mCV24996012	ABI	CRAMUS_MOUSE	f	SNP	T	G	G
ss149208199	ENSMUSSNP3737620	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32007084					SNP	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:48529504 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19137	CpG island 19137	727 bp proximal
E2f8	E2F transcription factor 8	Intron
Gm2788	predicted gene 2788	within coordinates
Rr400335	regulatory region 400335	1190 bp upstream
Rr400336	regulatory region 400336	1893 bp upstream
Rr646934	regulatory region 646934	1761 bp distal
Rr646935	regulatory region 646935	376 bp distal
Rr646936	regulatory region 646936	within coordinates
Rr646937	regulatory region 646937	658 bp proximal
Rr646938	regulatory region 646938	1275 bp proximal
Rr646939	regulatory region 646939	1629 bp proximal
Rr646940	regulatory region 646940	1830 bp proximal
Tssr66766	transcription start site region 66766	1782 bp downstream
Tssr66767	transcription start site region 66767	1776 bp downstream
Tssr66768	transcription start site region 66768	1576 bp upstream
Tssr72628	transcription start site region 72628	1662 bp upstream
Tssr72629	transcription start site region 72629	1604 bp upstream
Tssr72630	transcription start site region 72630	1223 bp downstream
Tssr72631	transcription start site region 72631	1236 bp downstream
Tssr72632	transcription start site region 72632	1276 bp downstream
Tssr72633	transcription start site region 72633	1848 bp downstream
Tssr72634	transcription start site region 72634	1885 bp downstream