rs32008254 SNP Detail

Summary

• ID
  rs32008254
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:106020114 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAGAGAAATC TTTCATCTTT ATTGGAAGCT GTTTCCTCTA
  GAGCTTCATA GACCTGCCCA ACTTCTCGAA GAAGGTGCTC AGTCCCGAAT GTACAGGCAA
  K
  GATCTCTGTG GAGATAGCTT CTATTTGATT TTGCCAGAGT TGCAAGGAGT TGCTGTTACC
  TTTCTTATGC TTTTTTGTTT GTACTATTGA CCACAGTGA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
ss47114696	NES11603561	PERLEGEN	MM_PANEL2	f	SNP			G		T		G	T		T
ss145611934	ENSMUSSNP3672626	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss322371189	CHEV_7_113564421	CHEVERUD	SCREENING_POP	f	SNP						G			G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
rs32008254					SNP	G	G	G	G	T	G	G	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47114696	NES11603561	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:106020114 () rs orientation: forward

Symbol	Name	Function Class
Gvin-ps6	GTPase, very large interferon inducible, pseudogene 6	within coordinates