rs32010696 SNP Detail

Summary

• ID
  rs32010696
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152389753 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGTACTCAG AGGTCCCTGG
  GAAGGAAGCC GGGATGGAGG GTGTGGCTCT GGCCAAGAGG ATGGTGAAGG TTAATATGAA
  GGTTAATATG AGTGAGTGCT CAATATTGAG ATACTGTAGG ACCTTGTCAG GCTGGAGAGA
  ACAGGCAAGT GGCTGGTTCT GTGTTGTAAT GCAGCCAGAG TTGACAGAAC CTCGGGGGCT
  R
  GGTAAATGAA TTCTAGCTTA TTCTTGACAT AATAGACAGG CATTCTATCA GCAGGGAGGT
  GACCCCAGTA CCAGTTCCTC CACCAAAACT GTGAGATTCC AGAAGCCTCA AAGACGTGTG
  CCCTGGTTTG TAGTAAGCCA GGGAAGGCTC CAGGAGAGCC TCAGGCCAGT CCAGCTGGAA
  GTGTTCCCCG GGCCACCCGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45596461	mCV23461751	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32010696					SNP	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152389753 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm70210	predicted gene, 70210			within coordinates
Icmt	isoprenylcysteine carboxyl methyltransferase			mRNA-UTR
				Noncoding-Transcript-Variant
Rnf207	ring finger protein 207			1723 bp downstream
Rr605836	regulatory region 605836			1725 bp distal
Rr605837	regulatory region 605837			227 bp distal
Tssr44828	transcription start site region 44828			26 bp upstream
Tssr44829	transcription start site region 44829			13 bp upstream