rs32013322 SNP Detail

Summary

• ID
  rs32013322
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:91075298 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTTAGAATG ACATCTAAAA
  TAGGTTTGGT AAGGTTGGAA TACAGGTGAG CCACAGATTG CGAGAACATC ATAATGTCTT
  CGGTAAGAGA CTGGTCAGGG TTTGCCAGCC TCCCATCCAT ATTTATCACC TTATAATAAG
  TCTGATTTGC GAAATAGGTC TCATAGGCAT GGTCTACTAA GCGAGTTCTA AAGGCCAATG
  Y
  CAGTTTGCAT TCCAGGTACC TGATAGCACT GTTGACAAAG GTAGCAGGGA TAGCAATCAT
  AAGCCACTTG ATTAATTTGA TGATGAAAGT CCGAGGCTTC TTTTCCACGA TGCTTTTCAC
  GATTTTCCCA TCCAGACCAG CCACATAAAT AGAGAGAAAT GTTCTTGAGA TTAGAGCCAC
  CGAGTGGAGG CAGAGCCACC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss48114195	NES12054991	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32013322					SNP	C	C	C	C	C	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48114195	NES12054991	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:91075298 () rs orientation: forward

Symbol	Name	Function Class
Abcd2	ATP-binding cassette, sub-family D member 2	within coordinates
Rr507988	regulatory region 507988	694 bp proximal
Tssr135946	transcription start site region 135946	101 bp upstream
Tssr135947	transcription start site region 135947	290 bp downstream
Tssr135948	transcription start site region 135948	310 bp downstream
Tssr135949	transcription start site region 135949	345 bp downstream
Tssr135950	transcription start site region 135950	418 bp downstream
Tssr135951	transcription start site region 135951	616 bp downstream
Tssr135952	transcription start site region 135952	638 bp downstream
Tssr135953	transcription start site region 135953	915 bp downstream
Tssr135954	transcription start site region 135954	937 bp downstream