rs32013323 SNP Detail

Summary

• ID
  rs32013323
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:91076468 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAATATACA TCCCGTCTCT
  AAGATTTCTA CAAAGGGGAA GGCAGAGGGA AGGAAGGATT GCAGCAGCTT TAATGAGCCC
  AGAGAGAAAG AAACAGCGAG AGGAGGGAGG AGCCTCAAGA GGATTAACGG AACCGGCCCA
  GGGAAAGGAG TCAGACAAGA GAGTGATAAC AGCGAGAGGC ATAAGACAAA ATAGCAAACA
  Y
  GTATCCTTGA GAATGTTTTG TTCAGAAGAT GTTGTCCCCC CCCCCCCTCA CTCCCGCCCT
  TCGCCCTTGT TTCGACTCTC CCCAGATATT CACAGAAACT ATTAGATTGG CTGCTATTGT
  AAATAAGCTG GAGGCGAGCT TGGGTATTAC AGAAAACAGT CACTCAGAGC TACACCCAGA
  GTTCTTCCCC AAGATCCCTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
ss48114197	NES12054992	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
rs32013323					SNP	T	T	T	T	T	T	C	T	T	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48114197	NES12054992	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:91076468 () rs orientation: forward

Symbol	Name	Function Class
Abcd2	ATP-binding cassette, sub-family D member 2	466 bp upstream
Rr507988	regulatory region 507988	within coordinates
Tssr135946	transcription start site region 135946	1271 bp upstream
Tssr135947	transcription start site region 135947	864 bp upstream
Tssr135948	transcription start site region 135948	833 bp upstream
Tssr135949	transcription start site region 135949	810 bp upstream
Tssr135950	transcription start site region 135950	740 bp upstream
Tssr135951	transcription start site region 135951	543 bp upstream
Tssr135952	transcription start site region 135952	440 bp upstream
Tssr135953	transcription start site region 135953	238 bp upstream
Tssr135954	transcription start site region 135954	215 bp upstream