rs32013349 SNP Detail

Summary

• ID
  rs32013349
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:46847074 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAGTAGAAC TGAGCATAGC
  CTTTGTTTAA CTGTGTAACT GGACAGCAAA TGGTGGGTGG CCTCTCTGTC CAAGGGAAAA
  CATTCAGAGG ATCAGAAAGC GAAACTTCCA AGGGCTTGGT GGGCCCTAGT TGTTCTCCAG
  TGACCCTGAA GTTGTCTGTA AGAAAAGAAA AGAGAAAGCT GTGTAAGAAT TTTTGCACAG
  R
  GCATATAAGC TGTTGTGACA AGTCAGCAGT TCTCAAATTA TGTATGGGTC ATGACCCCAC
  ACCTTCCAAA GACCATGGGA AGACCATATT CACATTACAA TTCATAACAG TAGCAAAATG
  ACAGTTATGA AGTAGCAACG AGAATAATTT TATGGTTGGG TGTGTGTGTG TGTGTGCACG
  CACGTGGGGT CACCACAACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss49302046	NES12757266	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	A	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs32013349					SNP	A	A	A	A	G	A	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49302046	NES12757266	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:46847074 () rs orientation: forward

Symbol	Name	Function Class
Cdo1	cysteine dioxygenase 1, cytosolic	within coordinates
Rr393660	regulatory region 393660	within coordinates
Tssr153260	transcription start site region 153260	595 bp upstream
Tssr153261	transcription start site region 153261	435 bp upstream
Tssr153262	transcription start site region 153262	1725 bp downstream