rs32013350 SNP Detail

Summary

• ID
  rs32013350
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:46845177 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTGTACAT CTGCATCACT
  TTAGGATATT ATATTGTATG TGATTGTATC TATATATTAT ATACATATAT ATTACACATT
  CATTATATAT ACATATATAT GTATATATAT ATATATACAT ACATATATAT ATATGTATAA
  TTAGTATATT GTAGCCATAG GAGAAAAGTA ATAGTATCTA ATATGCTAGG CCTTGCTTTC
  Y
  AGAATGAATA ATTGTGTTAT GCCCAAGTAA CTTCGAATAA TCTTTACTAT GGGGTAAACA
  TCCAATAAAT GTTAAGATCC ATCTCAAAGA TAAGATGCTT AATGTAAATG CTTCCAGGGT
  GATAGGTCTA GAAACTCTTT TCAGAGAAGG TTTTACTTCC CAACTGAGTC CCAAGATTGC
  CTACTCCAAG ATGACAAGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ
ss49302047	NES12757326	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ
rs32013350					SNP	C	C	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49302047	NES12757326	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:46845177 () rs orientation: forward

Symbol	Name	Function Class
Cdo1	cysteine dioxygenase 1, cytosolic	1083 bp downstream
Gm54021	predicted gene, 54021	621 bp upstream
Rr393660	regulatory region 393660	936 bp upstream
Tssr153260	transcription start site region 153260	1299 bp downstream
Tssr153261	transcription start site region 153261	1459 bp downstream