rs32013631 SNP Detail

Summary

• ID
  rs32013631
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142014309 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GAATGGAGAC AGATAGAGAC AAGCTCTAGA ACCACAGACT AGGGGAGCAC CACATGTGGG
  ACCCTGGACA TGGCTGGGGA GCAAAGGCTA ACTAAGAGTG TCCAAGGCCA TGACCTTGAA
  GCATCAAGAA CTAGTTCCAC CATGTTCATT GAGCACACTT GGAAGCACAG AAGATTTCCA
  TGCAAAGCAA TTGAAAGCAG TCCACGGACA CTAAAGGGAC CATGAATTCT GGACATTGTG
  GGAGACATAG CTACTCTCAG GTCTATGGAC CAGAGTTGCA AGGAGTAGCC TTACTCACCT
  Y
  TACCCTCAGC CCTTTTCTGT CATTCCAGGA GGCTATAGCT TGCTTGCTCA ACACTTCCTG
  ATGAGTGGTT TGGGTTTAGT TGGTTTTTGG TTTTTTGTTT TTTTGTTTTG TTTTGTTTTG
  TTTTAACTCT TCTTCTGTTG CAGCAACATA GGAAAAAAAA AAAAAAAACC CAAGCCCCAT
  AGGTTTCAAA CCTCAACCTG CTACAGGAAG GAGGAAGTGA AACCTGGGGC GGGAAGGGTG
  GGGGGCTGAG GCTCTAGGCC ACCGCCCATC TACAGAGAAA CACCAGGAGC CATAACAAGT
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46094702	mCV22625279	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss145986121	ENSMUSSNP6688052	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32013631					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142014309 () rs orientation: forward

Symbol	Name	Function Class
D430042D18Rik	Riken cDNA D430042D18 gene	within coordinates
Lsp1	lymphocyte specific 1	274 bp upstream
Rr154799	regulatory region 154799	1709 bp distal
Rr166987	regulatory region 166987	91 bp proximal
Rr400723	regulatory region 400723	29 bp upstream
Tssr2454	transcription start site region 2454	911 bp downstream
Tssr70170	transcription start site region 70170	251 bp upstream
Tssr70171	transcription start site region 70171	262 bp upstream