rs32014314 SNP Detail

Summary

• ID
  rs32014314
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:106104534 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGGCTTATT TTGTTCTGTT ATAGAGCCAA ATGTATGTTT
  CTCCAGGTTA GCTCTGTTTC GATTGAATTT AGGGCAGGTG GCTCGCATGT CTCCAGCTAA
  K
  TTTTGAGCTA TTATTTTCCA TATGGTGGCA GAGATAGCAG GAGTGAGCTT GCGCCATAGG
  AAGTCAACAA AGGATGTGAT TGCGGTGGCA CCTTGGCAG                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47115312	NES11602377	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	T	G	T	G	T	T	G	T	T
ss145614782	ENSMUSSNP2414316	ENSEMBL	ENSEMBL_Sanger	f	SNP		G						G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32014314					SNP	G	G	G	G	G	G	T	G	T	G	T	T	G	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47115312	NES11602377	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:106104534 () rs orientation: forward

Symbol	Name	Function Class
Gm72977	predicted gene, 72977	within coordinates
Gvin-ps7	GTPase, very large interferon inducible, pseudogene 7	within coordinates
Tssr68401	transcription start site region 68401	1689 bp downstream
Tssr74117	transcription start site region 74117	1801 bp upstream
Tssr74118	transcription start site region 74118	1754 bp upstream
Tssr74119	transcription start site region 74119	1356 bp upstream
Tssr74120	transcription start site region 74120	1339 bp upstream
Tssr74121	transcription start site region 74121	1276 bp upstream
Tssr74122	transcription start site region 74122	1259 bp upstream
Tssr74123	transcription start site region 74123	1226 bp upstream
Tssr74124	transcription start site region 74124	1181 bp upstream
Tssr74125	transcription start site region 74125	1170 bp upstream
Tssr74126	transcription start site region 74126	1134 bp upstream
Tssr74127	transcription start site region 74127	983 bp upstream
Tssr74128	transcription start site region 74128	903 bp upstream
Tssr74129	transcription start site region 74129	372 bp upstream
Tssr74130	transcription start site region 74130	323 bp upstream
Tssr74131	transcription start site region 74131	112 bp upstream
Tssr74132	transcription start site region 74132	14 bp downstream
Tssr74133	transcription start site region 74133	713 bp downstream
Tssr74134	transcription start site region 74134	940 bp downstream
Tssr74135	transcription start site region 74135	1023 bp downstream
Tssr74136	transcription start site region 74136	1091 bp downstream
Tssr74137	transcription start site region 74137	1157 bp downstream
Tssr74138	transcription start site region 74138	1187 bp downstream
Tssr74139	transcription start site region 74139	1221 bp downstream
Tssr74140	transcription start site region 74140	1276 bp downstream
Tssr74141	transcription start site region 74141	1676 bp downstream
Tssr74142	transcription start site region 74142	1819 bp downstream