rs32014323 SNP Detail

Summary

• ID
  rs32014323
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:106104781 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTTCACAGGG TCATTTGCAG TCTTGAATGC CTCGTGCATT
  TTCTTGAAAT CCTTGGATGC TCTTTGGAAT AAGTACAAGG ATAAGTCAAT GATGTAGTCT
  Y
  TGGTAAATGT GTAGTCTCCC TCACAGGGTT CAGATTTCAG CTCATTTTCT ATGATCTTCA
  AGATTTCATG AAAGTAATTG TGACTGTAAT CACGCTTTTG                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss47115321	NES11602381	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs32014323					SNP	T	T	T	T	T	T	T	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47115321	NES11602381	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:106104781 () rs orientation: forward

Symbol	Name	Function Class
Gm72977	predicted gene, 72977	within coordinates
Gvin4	GTPase, very large interferon inducible, family member 4	within coordinates
Tssr68401	transcription start site region 68401	1936 bp downstream
Tssr74119	transcription start site region 74119	1603 bp upstream
Tssr74120	transcription start site region 74120	1586 bp upstream
Tssr74121	transcription start site region 74121	1523 bp upstream
Tssr74122	transcription start site region 74122	1506 bp upstream
Tssr74123	transcription start site region 74123	1473 bp upstream
Tssr74124	transcription start site region 74124	1428 bp upstream
Tssr74125	transcription start site region 74125	1417 bp upstream
Tssr74126	transcription start site region 74126	1381 bp upstream
Tssr74127	transcription start site region 74127	1230 bp upstream
Tssr74128	transcription start site region 74128	1150 bp upstream
Tssr74129	transcription start site region 74129	619 bp upstream
Tssr74130	transcription start site region 74130	570 bp upstream
Tssr74131	transcription start site region 74131	359 bp upstream
Tssr74132	transcription start site region 74132	183 bp upstream
Tssr74133	transcription start site region 74133	466 bp downstream
Tssr74134	transcription start site region 74134	693 bp downstream
Tssr74135	transcription start site region 74135	776 bp downstream
Tssr74136	transcription start site region 74136	844 bp downstream
Tssr74137	transcription start site region 74137	910 bp downstream
Tssr74138	transcription start site region 74138	940 bp downstream
Tssr74139	transcription start site region 74139	974 bp downstream
Tssr74140	transcription start site region 74140	1029 bp downstream
Tssr74141	transcription start site region 74141	1429 bp downstream
Tssr74142	transcription start site region 74142	1572 bp downstream