rs32014385 SNP Detail

Summary

• ID
  rs32014385
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:91077190 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGTTTAAAA ATTATTCACA
  TTCCCAGTGG AAGGCATAAG GATCAATAGT CAAGCAAAAC TTTGTATAAT TTTTAATAAA
  TTGAAGGTCT TTTTTTGAAG GCAAGGCAAA GGTGATTTTG CATGATAGAG CCTTTCTCTG
  CTCCTCTCTT CTGTCTTTCC AACGACTGGC TTATCCTGAA GGTGTGCATT TAAGCCAGAG
  Y
  CCAGCACAGT TAGGTAGAAC GGCTTATTTT AACCTGCTAG TGTTATTTGA CCCTTAAGCT
  AAGCATCATT TTATACTTGG GCCTTATTAT GCACAGACTC TCCCTTTTGA TCCTCCATAG
  TAGTTCCAGG GCAGGAGTGC ACTTTGACAC CCCCACATCT GTCCTGATTT AAAGAAGTGA
  AAGATAGCTA CATGGTGATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss48114199	NES12054993	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32014385					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48114199	NES12054993	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:91077190 () rs orientation: forward

Symbol	Name	Function Class
Abcd2	ATP-binding cassette, sub-family D member 2	1188 bp upstream
Rr507988	regulatory region 507988	698 bp distal
Tssr135946	transcription start site region 135946	1993 bp upstream
Tssr135947	transcription start site region 135947	1586 bp upstream
Tssr135948	transcription start site region 135948	1555 bp upstream
Tssr135949	transcription start site region 135949	1532 bp upstream
Tssr135950	transcription start site region 135950	1462 bp upstream
Tssr135951	transcription start site region 135951	1265 bp upstream
Tssr135952	transcription start site region 135952	1162 bp upstream
Tssr135953	transcription start site region 135953	960 bp upstream
Tssr135954	transcription start site region 135954	937 bp upstream