rs32014427 SNP Detail

Summary

• ID
  rs32014427
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:106107536 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAAGAGACAT GTTGGAGGAA GCTGAGTTGT TGGGTATGTT
  CCTTGGCATC TCCATGAAGA TTGGTGAACA TCAGACAATT GTCAAACATG TCCTCACCTT
  K
  GCCGGCTGGA TAGAACCAAC AGATTTCCAC CACTCCCTGC ATCAGGACAC AGTGTTTGTT
  GCTTCCTCTG CAGTGTCTGT GAAAAAACAC ATCATGTTT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47115378	NES11602405	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	T
ss145614948	ENSMUSSNP1915874	ENSEMBL	ENSEMBL_Sanger	f	SNP	T						T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32014427					SNP	?	G	G	G	G	G	?	G	G	G	G	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47115378	NES11602405	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:106107536 () rs orientation: forward

Symbol	Name	Function Class
Gm72977	predicted gene, 72977	within coordinates
Gvin-ps7	GTPase, very large interferon inducible, pseudogene 7	within coordinates
Tssr74135	transcription start site region 74135	1946 bp upstream
Tssr74136	transcription start site region 74136	1900 bp upstream
Tssr74137	transcription start site region 74137	1834 bp upstream
Tssr74138	transcription start site region 74138	1796 bp upstream
Tssr74139	transcription start site region 74139	1754 bp upstream
Tssr74140	transcription start site region 74140	1701 bp upstream
Tssr74141	transcription start site region 74141	1311 bp upstream
Tssr74142	transcription start site region 74142	1157 bp upstream
Tssr74143	transcription start site region 74143	882 bp downstream
Tssr74144	transcription start site region 74144	1072 bp downstream
Tssr74145	transcription start site region 74145	1177 bp downstream
Tssr74146	transcription start site region 74146	1725 bp downstream
Tssr74147	transcription start site region 74147	1793 bp downstream