rs32014564 SNP Detail

Summary

• ID
  rs32014564
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:103775825 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACTAGAAACC AAAACTGAAG CTGACTCACT GATGTCAACT
  CCCATTTCAG TCACAACTGC TGACTCCATT CATTCATTCA TTCATTCATT CATTCATCCT
  R
  GGGTAAATCT CCAATGGTGT GTACATGCAA AGATTTAAAT TTATATGGTG CATTTTCTCC
  AGGCAGGATT TAAGCGCACT TACAAGCAAA GAATCTAGAA                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46631417	NES10402686	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32014564					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46631417	NES10402686	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:103775825 () rs orientation: forward

Symbol	Name	Function Class
Rr615887	regulatory region 615887	1434 bp proximal
Slc10a6	solute carrier family 10 (sodium/bile acid cotransporter family), member 6	within coordinates
Tssr52162	transcription start site region 52162	1277 bp downstream
Tssr52163	transcription start site region 52163	1320 bp downstream