rs32014570 SNP Detail

Summary

• ID
  rs32014570
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:103777092 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGGT GGAGTTGCCC GCACAGTCTG
  Y
  GCTCATCTCC TCTCATGAAT TAGAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45773332	mCV24430481	ABI	CRAMUS_MOUSE	f	SNP	T			C
ss46631423	NES10402700	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	C	C		C	C	C	C		C
ss148947315	ENSMUSSNP4061725	ENSEMBL	ENSEMBL_Sanger	f	SNP	T			C
ss321633160	CHEV_5_104058245	CHEVERUD	SCREENING_POP	f	SNP						C					C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32014570					SNP	T	T	T	C	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46631423	NES10402700	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:103777092 () rs orientation: forward

Symbol	Name	Function Class
Rr615887	regulatory region 615887	167 bp proximal
Slc10a6	solute carrier family 10 (sodium/bile acid cotransporter family), member 6	within coordinates
Tssr52162	transcription start site region 52162	10 bp downstream
Tssr52163	transcription start site region 52163	53 bp downstream