rs32014572 SNP Detail

Summary

• ID
  rs32014572
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:103778034 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCTTCTTC TTTTGGAGAC
  TTAAGTCAAC TTTGAGACAC GCACCCTTGG GCCACCTAGT GAAGTCTGGG AGTCTTGCAA
  ATGTTCCCTT GGAGAGTGTA GTCTGAGGAC CACTTCTGAT GCTGTGCACC ATGGCCCATT
  CTAAGCTGAG GGAAAAGCAG ACCACAACAG TATGGTTCTG GGAGATCAAA GTTCAAAACT
  R
  TCAGCTGCCA CCCTCTTCCC GCTGACAGCA GAGGTGTTTT TGTTTGTCTC TTTGTTTGTT
  TGCAGTGTGC TGAGTGAGAA CAAGGCTCAT TTTGTCAACC CCTCCCCTTC CTTAAGAGAG
  ATACTTGCTG GGCTTCTTCT TGGTTTGGCA AACCGGTTCC ATGACAAAAT GACCATGGCG
  GCATGCTGAC TCCACTTGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46631427	NES10402709	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32014572					SNP	A	A	A	A	A	A	A	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46631427	NES10402709	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:103778034 () rs orientation: forward

Symbol	Name	Function Class
Slc10a6	solute carrier family 10 (sodium/bile acid cotransporter family), member 6	882 bp upstream
Tssr52162	transcription start site region 52162	899 bp upstream
Tssr52163	transcription start site region 52163	872 bp upstream