rs32015086 SNP Detail

Summary

• ID
  rs32015086
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:154492593 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACTACACTTA CTTTTGTCTC TAATCACTGA GAAACGTGTT
  TTTTATAAAA CTATTCTATT GCGGCTTTGT TTTATATTAT CAATGAAATG ATCAAAAAAG
  R
  TCATGATATT TTAAGGTTTT GTACACAAAG AAAGGAGAAT GATACTAATA ATATTCTGGG
  TATACATTTT ACCTTTATTT CCAAGGGACC TCTCTGACC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	DBA/2J
ss45096256	mCV23100361	ABI	CRAMUS_MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	DBA/2J
rs32015086					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:154492593 () rs orientation: forward

Symbol	Name	Function Class
Cacna1e	calcium channel, voltage-dependent, R type, alpha 1E subunit	Intron
Rr396402	regulatory region 396402	677 bp upstream
Rr420845	regulatory region 420845	947 bp proximal