rs32016193 SNP Detail

Summary

• ID
  rs32016193
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:77040735 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTCTTTTAA AAATTCAAAG
  CCTCTTAACT ATGGGTTCCA CTAAAATGTG TTCTTACTTC AAGAGGGAAA ATTATCAGGG
  CACAGTCACA ATCAAAAGCA AAATCAAACT CCAACTGTCC AATGTCTAGG ATCCACTCAC
  GATCTTCTAA GCTCCTCCAA GAGCTTGGGT CACTTCTCCA GCTCTGCCCT TTGTAGCACA
  Y
  ACCTTGTCTT CTAGGCTCCA GCTGCCTGTA CTCCACTGTT GCTGCTGTTC TTGGTGGTCA
  TCTCATGTAA AAGAACAGCA GGCTTGGAAG ATCCCACCAT GTATATCCAA GTGGAAGAAC
  CCGAAGGGTT ATAAAATTCC ACTGGATAAA TGGCTGGCTT CTGATGAAAG GCTTCACATG
  AGTCATATAA GTGAAAAATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
ss45096465	mCV23073437	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss144722350	ENSMUSSNP5187662	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
rs32016193					SNP	T	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:77040735 () rs orientation: forward

Symbol	Name	Function Class
Gm70876	predicted gene, 70876	within coordinates
Tfdp1-ps	transcription factor Dp 1, pseudogene	1772 bp upstream
Tssr7562	transcription start site region 7562	1768 bp upstream