rs32018141 SNP Detail

Summary

• ID
  rs32018141
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:152388929 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAGCTCTTG ATTAATCCTG
  GACTGGGCAA GAGCCTGGTC CTGCTGTGAG GCCCTTGCAG ATTTGGTGTG GTTTGCTGTC
  CTCAGAGCTC CTACTCTGAG ATGTAGAAGT CTTAGTCTGC CATTCATGAG CACAGAGTCA
  TGGGTGGAGA ATCCTGAGTG TCTCAGCTCA CACCCAGCGC TTATAAAGGC GTGCTGTGCT
  K
  CGAGGCTGAG GATCGTGTAC CGCGCCTTCC CTGCCAGCTC CAGCAGAATC CAGATCAGCC
  TACATAGTGC TCTGTGCCGC AGCCAGGTCC TCTCAGACTT GAGAAAACCC TTTTCCTTCT
  CCCCTGTTCC ACTGAGCAGA CCCTGCTGGG TTGCAAGTTT AGTGTTCCTG GCCTTCAGAC
  ATGTGGTCAC CCTTGAGTAC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45597761	mCV23461739	ABI	CRAMUS_MOUSE	f	SNP		T	G					G
ss46737975	NES11004688	PERLEGEN	MM_PANEL2	f	SNP	T		G	G	G	G	G		G	G	G	G	G	G	G	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32018141					SNP	T	T	G	G	G	G	G	G	G	G	G	G	G	G	G	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46737975	NES11004688	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152388929 () rs orientation: forward

Symbol	Name	Function Class
Gm70210	predicted gene, 70210	within coordinates
Icmt	isoprenylcysteine carboxyl methyltransferase	within coordinates
Rr605836	regulatory region 605836	901 bp distal
Rr605837	regulatory region 605837	223 bp proximal
Tssr44828	transcription start site region 44828	791 bp downstream
Tssr44829	transcription start site region 44829	799 bp downstream