rs32018473 SNP Detail

Summary

• ID
  rs32018473
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:126388931 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGACTCCCTC TTCTGGTGTG
  TCTGAAGACA GCTACAGTGT ACTTACATAT AATAATAAAT AAAAAATCTT AAAAAAAAAA
  AAAAAAAGAA AGCTGCCTGC AGTAAGTCAG CTATAAAATG CTCCACACAC CCTCCCACGG
  CACTCAGTTT TGCTGACTAG ACATAATGAC AGCAGCCACA ATTAAACAAC AGCGAAGGCG
  K
  TACCCCTTCC AATACTGAAA ACCATAAGGT GGTCTGTTGG AGATTTTTTA AGGGTGAATC
  TTCTATTTGC TCATCAACTC ACTGCTTTTT AATATTTACC GGGATATGAT TTGCACTGGC
  AGAAACACAC CACCCTAATT GCTGTAACAT TAATCACTGA TGTTTTTACC ATCCATCCGT
  TCCCAGGGAA CTGAAGTCTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss47616094	NES11170654	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	G	T	T	T		G	G	T	G		T
ss322860918	CHEV_8_128186092	CHEVERUD	SCREENING_POP	f	SNP											G					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32018473					SNP	T	T	T	T	T	T	G	T	T	T	G	G	G	T	G	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47616094	NES11170654	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:126388931 () rs orientation: forward

Symbol	Name	Function Class
D8Ertd620e	DNA segment, Chr 8, ERATO Doi 620, expressed	424 bp distal
Gm30871	predicted gene, 30871	within coordinates
Rr180111	regulatory region 180111	270 bp proximal
Rr183380	regulatory region 183380	1364 bp distal
Rr188607	regulatory region 188607	1471 bp proximal