rs32018975 SNP Detail

Summary

• ID
  rs32018975
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:24600927 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGAGAGCT GGAGACATGG
  CTCAGTGGTA GGCTTTTTGT TTGTTTGTGT TTGTTTGTTT GACAAACATG AACCATAGAT
  TCAATTCCTA GTACCCTGGG TGGGAAAAAA AACTGATCCA TTCTTGGTAA AATTAAAAAA
  GCAAAAACAA AAACAGAAAA ACGTACCCCA CATTGATCCA GAGAGAATAA TGAGTTGAAA
  R
  CATAGAAGAG ACCAAAGTCT AATTTTTCTC TTTTTCTCCT AGTAATTTAT TTTTTATGTA
  CAGTGGTGTT TTGCCTGCAC GTATGTCTGT GTGAGGATGT CAGATACCCT GGAACTGGAG
  TTACAGACAG TTGTGAACTG CCATGTGGAT GCTGGGAATT GAACCCTGGT GCTCTGGAAG
  AGCAGGCAGT GCTCTTAACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss47615997	NES10289184	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs32018975					SNP	G	G	G	G	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47615997	NES10289184	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:24600927 () rs orientation: forward

Symbol	Name	Function Class
Abcb8	ATP-binding cassette, sub-family B member 8	within coordinates
Cpgi15597	CpG island 15597	1173 bp distal
Rr398999	regulatory region 398999	1459 bp downstream
Tssr45412	transcription start site region 45412	1499 bp downstream