rs32019917 SNP Detail

Summary

• ID
  rs32019917
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:126390040 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGTTTTTC ATAGGGGTTT
  GCAACTCCCA CGTTTATGCA AATGCATTCA CTTTACACGG TTAAACTTGA CCTTTTCAAT
  ACCTTGACTA ATCATTTAGT TGCTCAGCTT AAATGCTTTC TGCATTGGCT GTCCCTTAAA
  TATGGAAACC CACTGAAGCT GCCGAAGCCA TTGTTTGGTG CAGTCTCTGG AGCGTTCAGC
  R
  TATGAAGTCT GCAAGGTGCC TAGGGGTTTC AGAGAAGCAA CAGCTTGGAC AGTCTAACCT
  CCTGGCTCCG ATTAGGAGTC CGCTGTGGAG TTTATTAGAG ATAATAGAAA CAAGGAAGAG
  AGCTCATTGT GGTGGCACAG CACTGTTGTG CCAGCATTTG CAAGGCTCAG GCTGGAGGGC
  GGGGAGTATG TATCTAGCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47616109	NES11170659	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32019917					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47616109	NES11170659	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:126390040 () rs orientation: forward

Symbol	Name	Function Class
D8Ertd620e	DNA segment, Chr 8, ERATO Doi 620, expressed	1533 bp distal
Gm30871	predicted gene, 30871	within coordinates
Rr180111	regulatory region 180111	239 bp distal
Rr188607	regulatory region 188607	362 bp proximal