rs32019920 SNP Detail

Summary

• ID
  rs32019920
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:126390129 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATCATTTAG TTGCTCAGCT
  TAAATGCTTT CTGCATTGGC TGTCCCTTAA ATATGGAAAC CCACTGAAGC TGCCGAAGCC
  ATTGTTTGGT GCAGTCTCTG GAGCGTTCAG CGTATGAAGT CTGCAAGGTG CCTAGGGGTT
  TCAGAGAAGC AACAGCTTGG ACAGTCTAAC CTCCTGGCTC CGATTAGGAG TCCGCTGTGG
  W
  GTTTATTAGA GATAATAGAA ACAAGGAAGA GAGCTCATTG TGGTGGCACA GCACTGTTGT
  GCCAGCATTT GCAAGGCTCA GGCTGGAGGG CGGGGAGTAT GTATCTAGCT TGGAATGCAC
  AGTGAGTCTG TTTTAAAAAA AATTTTTTTT AAAAAGTCTG TTTAAAAAAT AAAGTACCAA
  CAAAATAAAG AGGAAGCCTG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47616112	NES11170660	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	T	A	A	A	T	A	A	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32019920					SNP	A	A	A	A	A	T	A	A	A	T	A	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47616112	NES11170660	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:126390129 () rs orientation: forward

Symbol	Name	Function Class
D8Ertd620e	DNA segment, Chr 8, ERATO Doi 620, expressed	1622 bp distal
Gm30871	predicted gene, 30871	within coordinates
Rr180111	regulatory region 180111	328 bp distal
Rr188607	regulatory region 188607	273 bp proximal