rs32021048 SNP Detail

Summary

• ID
  rs32021048
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:126394659 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTCAACAG GGTAGAAGAA
  GACCGCAAAA GATATCCTCT GACCTCCAGA CATGTGTCGT GAACAGTATG TCAGTACACA
  GTGACATACA AGTCATCACA CACACACACA CACACACACA TATACACACA TACACACACA
  CACACACAAT CATAAAGAAA ACGATACCAG GAACTTTCAT ATACTTCTTC ACAGATGCAA
  Y
  AATGAAGACT TTGGCTGAGG ATGTAACGCG GTGGGTGAGC ATGGCCTACC ATACTACAAG
  CTCTAGGTTC CATTCCCAGC ATTACCTGAA ATTGGGTTGT GGAGGCACAC AGACCTGTAA
  ATATAACCCA TCTCTGCAGG TTGGGCCAAG CTAGGTTTGG GGGCTGATGC CTGTGATCCT
  AGCACTGGAG GCTGTGATGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47616211	NES11170412	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32021048					SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47616211	NES11170412	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:126394659 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21286	CpG island 21286	1433 bp proximal
Gm30871	predicted gene, 30871	797 bp upstream
Gm63868	predicted gene, 63868	711 bp downstream
Map10	microtubule-associated protein 10	1898 bp upstream
Rr175263	regulatory region 175263	1342 bp proximal
Rr186277	regulatory region 186277	1541 bp proximal
Rr188607	regulatory region 188607	234 bp distal
Tssr80077	transcription start site region 80077	1908 bp upstream
Tssr83475	transcription start site region 83475	1817 bp downstream