rs32023041 SNP Detail

Summary

• ID
  rs32023041
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:85943680 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGGCCCAACA GATGACCCGG GGAAAAGTTG TGGACGCTTG
  CTCCCTTTCC ACACCCTGCT CTCTGTTATA TCTTTTCCTT TCATTTGGAA TTAGCCTATG
  R
  GATTCTGGGG ACAGTTGGCA CCTGGGCTGG AGCTTAGGCC TATGTGTTTA TACAACCGTT
  AAGGTGGGGT GCTGTGTGGC AGTCCCTAAC CTAAGACTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39352973	mCV25421830	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss148282862	ENSMUSSNP3745185	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32023041					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:85943680 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7499	CpG island 7499	within coordinates
Gm41375	predicted gene, 41375	863 bp upstream
Gramd4	GRAM domain containing 4	within coordinates
Rr507411	regulatory region 507411	1774 bp distal
Rr507412	regulatory region 507412	742 bp distal
Rr507413	regulatory region 507413	1205 bp distal
Rr507414	regulatory region 507414	within coordinates
Tssr132563	transcription start site region 132563	686 bp downstream
Tssr132564	transcription start site region 132564	628 bp downstream
Tssr135780	transcription start site region 135780	888 bp upstream