rs32024394 SNP Detail

Summary

• ID
  rs32024394
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:66361794 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTATG CAGATTTCAC CATCAGCCGA
  R
  GCTATTTTGA ATAGAAAGTA TCTAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss45097911	mCV24305073	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss144494177	ENSMUSSNP1220505	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss319754080	CHEV_1_66369209	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs32024394					SNP	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:66361794 () rs orientation: forward

Symbol	Name	Function Class
Gm10558	predicted gene 10558	within coordinates
Map2	microtubule-associated protein 2	within coordinates
Tssr7142	transcription start site region 7142	920 bp downstream
Tssr7143	transcription start site region 7143	896 bp downstream
Tssr7144	transcription start site region 7144	879 bp downstream
Tssr7145	transcription start site region 7145	829 bp downstream
Tssr7146	transcription start site region 7146	815 bp downstream
Tssr7147	transcription start site region 7147	774 bp downstream
Tssr7148	transcription start site region 7148	655 bp downstream
Tssr7149	transcription start site region 7149	623 bp downstream
Tssr7150	transcription start site region 7150	591 bp downstream
Tssr7151	transcription start site region 7151	562 bp downstream
Tssr7152	transcription start site region 7152	545 bp downstream
Tssr7153	transcription start site region 7153	516 bp downstream
Tssr7154	transcription start site region 7154	1312 bp upstream