CCAGG TGACCCCAGA GCCACTTCCG H AAGACCCCTT TCTAGGGCCT GTGGG H = A/C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
C57BL/6J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|
ss46095655 | mCV22939220 | ABI | CRAMUS_MOUSE | f | SNP | C | C | T | A | ||
ss322110006 | CHEV_7_16898833 | CHEVERUD | SCREENING_POP | f | SNP | T | C | ||||
SNP Consensus Information | |||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
C57BL/6J |
LG/J |
SM/J |
||||
rs32025412 | SNP | C | C | T | A | T | C |
Location: Chr7:16047409 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Bbc3 | BCL2 binding component 3 | within coordinates | ||||||
Cpgi18372 | CpG island 18372 | 332 bp distal | ||||||
Cpgi18373 | CpG island 18373 | 63 bp proximal | ||||||
Rr167075 | regulatory region 167075 | within coordinates | ||||||
Rr380460 | regulatory region 380460 | 1615 bp upstream | ||||||
Tssr64601 | transcription start site region 64601 | 131 bp upstream | ||||||
Tssr70734 | transcription start site region 70734 | 1059 bp upstream | ||||||
Tssr70735 | transcription start site region 70735 | 1014 bp upstream | ||||||
Tssr70736 | transcription start site region 70736 | 485 bp downstream | ||||||
Tssr70737 | transcription start site region 70737 | 550 bp downstream | ||||||
Tssr70738 | transcription start site region 70738 | 569 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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