rs32027289 SNP Detail

Summary

• ID
  rs32027289
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:80553859 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AATGAAATGC TGAGCCTGAA TTGTACTAGG CACACAGTCA
  GCACCAAGTA AGTGCTCATT AAGTCAGTTT CCCCTCTAAG CGTACGATTG CCTTTTGTGG
  Y
  AGTAGTGGTT TGTTTTTTGA AACAGGGCCT TGTCGTGTTG CCCAGGCTGG CTTCTAACTC
  ACCATCCTCC TATCTCAGTT TCTCTGGTGC TGGGTGACA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39353549	mCV22739776	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss148221187	ENSMUSSNP7018724	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32027289					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:80553859 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7376	CpG island 7376	1646 bp proximal
Rr506033	regulatory region 506033	1699 bp proximal
Tssr132233	transcription start site region 132233	1964 bp upstream
Tssr132234	transcription start site region 132234	1978 bp upstream
Tssr132235	transcription start site region 132235	1990 bp upstream