rs32027527 SNP Detail

Summary

• ID
  rs32027527
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:34876608 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATAAGTCTA CCTGGGGGGT
  GGGAGGGGGA TCAATAAATA GGCTTCTCCA TAGGAATAAA GGACATTGGA ACACAAAGCC
  CTCCAGTGCT GTATGATTGA CTAAGCAACA GCTTTGGATT TCTAGTCTCC ACATACAGCT
  TTCATTTTAG ATTAGTTCTC TTGCAGGTGG AATAGCAGGC AGAGAGAGAA GTGCGCACGT
  K
  TGTTGTTCTC ATCCTTTCAA AACGACATCA GAGTGGAGAC AACTGTAAAG TTTGCTTTTG
  GGAAATTTAT CTAGGTGTGT ACCATCATTT TTGAGTTTTA AAAAATTGTA GAATATACAT
  TTTAGGGATT AAAAAGTAGA ATTCCTTCAA TTCTTGTGGT TGCTTGGTTT CTGGTCATCC
  TGAGACAGAG GGAATCTGGT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39353498	mCV23392493	ABI	CRAMUS_MOUSE	f	SNP	G	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32027527					SNP	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:34876608 () rs orientation: forward

Symbol	Name	Function Class
Stk3	serine/threonine kinase 3	within coordinates
Tssr133982	transcription start site region 133982	234 bp upstream
Tssr133983	transcription start site region 133983	121 bp upstream