rs32027575 SNP Detail

Summary

• ID
  rs32027575
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:118086172 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTACTTCTTA AATTAAAAAC CAGTGAGCGT TAGTATTTTA ATTTGAAATG CCGATTGTTG
  GCCCAGCCCT TTATTTTCCA GTCTGGAGCT GAGGTGAGCT GCCTCCTTTA AGGTAGGCAC
  AGTCCCCACA CCCTCCACCT CTTATTTATC TCCCTGCCTT TAGGCTGCTA AGTTTGTAAC
  TCCTGACCTG AACTAGCACA TACTTAAAAA CACATTTCCT CACCCAAAAC TCTCTCCCAC
  CCTTGAGGTG TCTTCACCCT TCTCCCTCCC AACTCTTCCT TTCACATACA CCTTAAGACC
  Y
  CCTCCCCACA AATCCTCAGA GAATATTTGC ATCCATTCAC ACTGTCCTCT CCTTCATTTG
  CAAAACGCAT ATTCTCCCAG CCCATGAGCA TTCCAGGAAG GCTCCGAGCT GGGCAGTGGG
  AATTACTGAG GTGTCTGGAC GCAAAAGAGC TGAGTCATCT TCCTCAAAAA AACGATTTTC
  TTTGGGCACT GGCTAAACAA CTCTTTTTAT TTTTTGGTAG AGCCATCGTA TCTGAGAATA
  TTGGCATATA TGACTCTCCA GCACCAAATA TACACCAAAG GTGTGTGCAT GTCAGATAGA
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46096406	mCV27568661	ABI	CRAMUS_MOUSE	f	SNP		C	T
ss145780779	ENSMUSSNP4769889	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32027575					SNP	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:118086172 () rs orientation: forward

Symbol	Name	Function Class
Itpripl2	inositol 1,4,5-triphosphate receptor interacting protein-like 2	within coordinates
Rr381380	regulatory region 381380	within coordinates
Rr654485	regulatory region 654485	1376 bp proximal
Rr654486	regulatory region 654486	1573 bp proximal
Tssr74438	transcription start site region 74438	1292 bp upstream
Tssr74439	transcription start site region 74439	587 bp downstream
Tssr74440	transcription start site region 74440	1304 bp downstream