rs32028298 SNP Detail

Summary

• ID
  rs32028298
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:78139811 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TACCCACACA CAGGCTAGAC CTCATCCGCC GCAACTGTGG
  CGCCCTCCTG CTGTGTGCCA CTGTGCACTT TGGATGGTGT TGGGTGCACA GCATGAAATG
  Y
  CATGGCAAAG AACAGTGGGA TGGATGCAGG AGGGCTGTAA CCCATAGGGA GGCCAGCGAG
  GCGGGGGAGC AGGGCAAGCT AGGCACAGAG TTTGGATTC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39353377	mCV27572947	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	C	T
ss148180933	ENSMUSSNP1520490	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32028298					SNP	C	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:78139811 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7285	CpG island 7285	593 bp distal
Ncf4	neutrophil cytosolic factor 4	within coordinates
Rr505234	regulatory region 505234	626 bp distal
Rr505235	regulatory region 505235	817 bp proximal
Tssr131906	transcription start site region 131906	717 bp downstream