rs32031646 SNP Detail

Summary

• ID
  rs32031646
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:48533083 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCCTACCCC CAAGCCCCCA
  CCCCTTACCA CTTCTTATAT CCTAGTGCCT TGCCTCAGAA AATTCTCAGG ACAGCAAAGT
  CGGTGACTTG TAGTCCAGGT CACAGTCATT TCCAGCCCTC CCTCAACATG GGAGAAAGGG
  TGAGATACAT CATTTTTGTT TAGTGGTGGC TTCCCTGTCA GTTGTCATCA AAGTCGTGGA
  R
  CAGAATGAAA AAATGGTGCT TCGAAGAGAG GTTTAAAGTC TTGACGCTGT CAGTCATGAG
  ACCTTGAAAA GGAAGCAAGG ATCTTGGGAT TTAGCTCAGG GCAGAGGGAT TACTTAACAG
  GCTCAAGGCC CCAGGGGTCA TCTCCAGCAT CATACGCAAG TATAGTGCGT CAATTTGAAG
  TTTGGTGTGA TTTTAAAGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46096457	mCV23857832	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss149208229	ENSMUSSNP7128738	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32031646					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:48533083 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19137	CpG island 19137	862 bp distal
E2f8	E2F transcription factor 8	1739 bp upstream
Gm2788	predicted gene 2788	within coordinates
Rr400336	regulatory region 400336	1385 bp downstream
Rr646938	regulatory region 646938	1951 bp distal
Rr646939	regulatory region 646939	1750 bp distal
Rr646940	regulatory region 646940	1249 bp distal
Tssr66768	transcription start site region 66768	1970 bp downstream
Tssr66769	transcription start site region 66769	1469 bp downstream
Tssr66770	transcription start site region 66770	1474 bp upstream
Tssr72633	transcription start site region 72633	1716 bp upstream
Tssr72634	transcription start site region 72634	1664 bp upstream
Tssr72635	transcription start site region 72635	981 bp upstream
Tssr72636	transcription start site region 72636	within coordinates