rs32032163 SNP Detail

Summary

• ID
  rs32032163
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:48494022 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAAACTATA CAGAAAGCTA
  GATAGATAGT TTGACCAAGA TCACACAACC AAAAAATGGG AGAGCTACAT TTAAAAGGCT
  AATTAACTTG ACCCTTATAC AAGCTTCTGC TATAACATGT CTTCCAGGAG ACAGACATGG
  GTGAGCAATT CCAGTGACCA AGCATCTCAT CTGGTGGGAA CTGAGGTCTT ATAGATCCAT
  Y
  ATCTCTTTAT GGGGCATAGA AAGCATTGAT AAGAGGAGTC TTGGGGGCTT CAACTTGGTA
  ACATAAGGGA CAACCCAGGA ATAAGTGGTG TTCAAACACG GAAGGACTCC TCTAAAGCTG
  GAAGTCTCTT TTCATTGTTG ATTCTCATCT CCTTTGGGAA TGGACATCTA TGTAACTAAA
  ATACAGCAAA GCATCCTTCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46096662	mCV25161948	ABI	CRAMUS_MOUSE	f	SNP		T	C					C
ss48221987	NES11798566	PERLEGEN	MM_PANEL2	f	SNP	C		C	C	C	C	C		C	C	C	T	C	C	T	C
ss149207725	ENSMUSSNP1826782	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32032163					SNP	C	T	C	C	C	C	C	C	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48221987	NES11798566	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:48494022 () rs orientation: forward

Symbol	Name	Function Class
Csrp3	cysteine and glycine-rich protein 3	within coordinates
Rr646924	regulatory region 646924	1537 bp distal
Rr646925	regulatory region 646925	694 bp proximal
Tssr72622	transcription start site region 72622	612 bp upstream
Tssr72623	transcription start site region 72623	600 bp upstream
Tssr72624	transcription start site region 72624	937 bp downstream
Tssr72625	transcription start site region 72625	964 bp downstream