rs32033279 SNP Detail

Summary

• ID
  rs32033279
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:164268018 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAATGACCGG GAGAGCAGAA ACTGGCTTCG GGCTTCCTTC
  ATAAACCACA GCAGTTCCTC CTTTTGCTAG ATTACCCTAG CCATGTGAGT CAAGTACAAG
  S
  GTGGGGTAGT AGTCCTAACC ACAGTACTTC CCATTGCATG CTTGTCTCTG TGGGAAGATT
  AAATATCTGT TGAAAGGTAC ACTAACATTC GCAAGAGAT                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45098351	mCV24721507	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	C	G
ss145978669	ENSMUSSNP6095543	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32033279					SNP	C	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:164268018 () rs orientation: forward

Symbol	Name	Function Class
Atp1b1	ATPase, Na+/K+ transporting, beta 1 polypeptide	within coordinates
Rr13721	regulatory region 13721	1818 bp distal
Rr20253	regulatory region 20253	618 bp distal
Rr25447	regulatory region 25447	1533 bp distal
Rr25448	regulatory region 25448	1058 bp distal
Rr31656	regulatory region 31656	within coordinates
Tssr9784	transcription start site region 9784	1942 bp downstream
Tssr14741	transcription start site region 14741	1952 bp upstream
Tssr14742	transcription start site region 14742	1910 bp upstream
Tssr14743	transcription start site region 14743	1109 bp downstream
Tssr14744	transcription start site region 14744	1158 bp downstream