rs32033676 SNP Detail

Summary

• ID
  rs32033676
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:40516713 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTATTTTA ATTCCAGGGG
  ACATTCCTTT TGGGTGATGT AAGTCAGCCA ATTCTATGAA AGATCTATGA AAACAGTAAC
  GTACAATAAA TCCAATTCTA AGATTCTGTG CATGCCAATT CAACTATAAT GATTTGAGAA
  TGAGGGGGCT AAAAAGCTCC AGTCTCTGTT TTTTAACCCC CCCACACACA CACACACACA
  R
  ATACAAATAA CCTTGCTTTT CATGGTACTT AGGATCATAA TTTGTTGGCC CTTGCAGGCA
  GGGACTTGGT CATTAACTGC CTTTTCCGTA TCAAGGACCA TGTACTGTAC TGTCATAACC
  TCATATGGTC ATATAGCTAA TGTGATGTAA TAAGACAAGT GGCCTTCAGC CTTGTGCTAA
  GATTTGCTCA GCCATACCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39354733	mCV23354534	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss147693515	ENSMUSSNP1183448	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32033676					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:40516713 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7065	CpG island 7065	1053 bp proximal
Gm63080	predicted gene, 63080	within coordinates
Rr501588	regulatory region 501588	832 bp proximal
Rr501589	regulatory region 501589	1729 bp proximal
Tssr4586	transcription start site region 4586	1978 bp upstream
Tssr131170	transcription start site region 131170	1564 bp upstream
Tssr131171	transcription start site region 131171	1595 bp upstream
Tssr131172	transcription start site region 131172	1677 bp upstream
Tssr131173	transcription start site region 131173	1703 bp upstream
Tssr131174	transcription start site region 131174	1752 bp upstream
Tssr131175	transcription start site region 131175	1891 bp upstream
Tssr131176	transcription start site region 131176	1942 bp upstream
Tssr131177	transcription start site region 131177	1991 bp upstream
Zfpm2	zinc finger protein, multitype 2	1725 bp upstream