rs32036739 SNP Detail

Summary

• ID
  rs32036739
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:142035924 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACAAGGCTC CGTCATCTGA
  TGAATCTGAG AGACTCTCAC TTCAAGGGAA CTCTTTATCA CCGCTTCTTG GCAAGCTCAC
  AAGCCATTCT GTATCTTGAG TCTCAGAACT ACAGAACGCG GCTGTTGCAA ACTTAGGTCT
  GTAGAATGGT CTCCTTCTGT CTGCCGGGAG AATGTGCCTG TGTCTTTCCA GCACAGAGAG
  Y
  GTGACTGGCT GAGGACCTCA CAGATGCCAT TGACGGAGCC CTATGGTCTC AGATTGTCCC
  AGCCAGTGTC AGAGTATGAC AGGGAAGCAG TTATGGCCAC TCCCGGCAGA CCTGGGCTTC
  TTCTGATGCC ACTTTTGGCT TCATCCTGCT TCAGGATGCA TGGGGTTCAG GATGTGACCT
  GGCAGTGTGA TAGATGACCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45600198	mCV23209908	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss147753340	ENSMUSSNP2305332	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32036739					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:142035924 () rs orientation: forward

Symbol	Name	Function Class
Gm13052	predicted gene 13052	within coordinates
Gm54267	predicted gene, 54267	1965 bp downstream
Gm68665	predicted gene, 68665	within coordinates
Kazn	kazrin, periplakin interacting protein	within coordinates
Rr87137	regulatory region 87137	1677 bp proximal
Rr92931	regulatory region 92931	1924 bp distal
Tssr40127	transcription start site region 40127	871 bp downstream