rs32037746 SNP Detail

Summary

• ID
  rs32037746
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:80037927 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGGTAGGTTT AGACGCAGGG AAGATCAAGC AGATGGGCGT
  CATCTGTGGA CAGGAGAGCA CCAGGCGGAT TGGGGATTAC AAGGTCAAAT ATGGCTACAC
  Y
  GACATTGACC TGCTCAGGTA GGTGGCCATT TTTGCAGCCC CAGCCACTTG TGAGACCAGA
  GGACCTCGGT TAGAAGCAGA TGCCCGGCTA CAGTGGCAG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss39354864	mCV25283664	ABI	CRAMUS_MOUSE	f	SNP	C	C	C					C		T
ss63569798	NES17023079	PERLEGEN	MM_PANEL2	f	SNP	C		C	C	C	T	C		T	T	C	C	C	C	C	C	T
ss148214163	ENSMUSSNP1392962	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C							T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32037746					SNP	C	C	C	C	C	T	C	C	T	T	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63569798	NES17023079	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:80037927 () rs orientation: forward

Symbol	Name	Function Class
Rr304352	regulatory region 304352	1727 bp distal
Rr308002	regulatory region 308002	327 bp distal
Rr314587	regulatory region 314587	274 bp proximal
Tab1	TGF-beta activated kinase 1/MAP3K7 binding protein 1	within coordinates