rs32041411 SNP Detail

Summary

• ID
  rs32041411
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:78138101 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGAG CTGGGCTCTA TTGAGAAAAT
  K
  AAGGGAAGGG GGTTTTAGAA CTGTG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39355932	mCV27572921	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	T
ss148180890	ENSMUSSNP469102	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		T
ss325024234	CHEV_15_78084331	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32041411					SNP	G	G	T	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:78138101 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7285	CpG island 7285	835 bp proximal
Ncf4	neutrophil cytosolic factor 4	within coordinates
Rr505233	regulatory region 505233	1963 bp distal
Rr505234	regulatory region 505234	1063 bp proximal
Tssr131904	transcription start site region 131904	668 bp downstream
Tssr131905	transcription start site region 131905	598 bp downstream
Tssr131906	transcription start site region 131906	963 bp upstream