rs32043856 SNP Detail

Summary

• ID
  rs32043856
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:101936848 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGCA GGTGCTGGGG GCTCCGGGTC
  M
  CGGATATCCG TGTCCCGCTC TGTCT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39355564	mCV23291270	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	C	C
ss148490928	ENSMUSSNP1800779	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	A		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32043856					SNP	C	C	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:101936848 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7794	CpG island 7794	within coordinates
D15Mit40	DNA segment, Chr 15, Massachusetts Institute of Technology 40	889 bp proximal
Krt18	keratin 18	within coordinates
Rr311450	regulatory region 311450	within coordinates
Tssr133313	transcription start site region 133313	202 bp downstream
Tssr133314	transcription start site region 133314	178 bp downstream
Tssr133315	transcription start site region 133315	1468 bp upstream