rs32044533 SNP Detail

Summary

• ID
  rs32044533
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:177152265 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTAGTCTATG GTACTTTGCT AAGCTTTGGT TCCGTTTAAA ATACCAGAAA GGGTGATGGT
  TGGAAGGAGA TGGTTAGTGG GACAGCGTTT GTAAACACAG CAGAGGTGGC TAGGACCTTC
  TCTGTCGCTG GTGACTAGCA TAGTCCTTGG TCTCAGAAAC TTGTGCTTCA TACTTCTGCA
  ATGATTATGC AGGAAGCATT AATTCCAGAG TTTATGTGTT CCCTTAGCTG GAAAGTTGTG
  TTGCCAGACA GACAGACAGA CAGACCCAGA CCCAGACCCA GACCCAGACC CCCCCCCCCC
  M
  CACACACACA CACAAACCAC TTGATTTAGG GTCCCTTTCC AATAAAACAT ACCAAACAAA
  CTCACACTCT TTCTCTTTCT GGGGAATGTT AAATATTGTT AATATGAGAG GTGTCTGTTC
  CAGGAACTAT GAGCTACCAC ATGCAAAGTG TTAGATAAAA AGGCAATTGC TTGTGGCTGG
  GGAAGGTAAG AGCATTCACT ACTCTTCGAG AGGACTTGAG TATAGTTTCT AGCATGCACA
  TGGCTGCTTA CAACTCTATA ATTCTAGTTC TGTGGACTCC AACACCCTCT TCTGGGCTCC
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45100044	mCV24606459	ABI	CRAMUS_MOUSE	f	SNP	A	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32044533					SNP	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:177152265 () rs orientation: forward

Symbol	Name	Function Class
Cpgi1079	CpG island 1079	1453 bp distal
Gm36904	predicted gene, 36904	within coordinates
Rr423981	regulatory region 423981	1948 bp distal
Rr423982	regulatory region 423982	1335 bp distal