rs32046183 SNP Detail

Summary

• ID
  rs32046183
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:34100852 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATCAGATT AAACTGCCAT
  AGTTTTCTAG GTTGGCTTTA TTTATTTTTT TAATATATTT CTCCCCTGCC TCCACCTTCA
  TAATGCTGGG ATTACAAGTG CATACCACCA CATGTAGTTG TTTTCTAGAT CTTTGTTTTG
  ATATAGAAGC AATCAGTGCC TCATTGGTAA CTAGTTTCTA GTAGAGATCA TACAGGGCTA
  K
  TAGCCAGGCA CTGTGTTAAA TAATTACTGG ATAGAGAAAT AATAACAGGT TTTTATATTT
  GTCTGTTTAT CTGTTTGGGT TTGTTTTGTT TGTTTCTTTG TTTTTTGTTT GTTTGGTTTT
  GTTTTTTAAG ATAGGGTTTC TTTGCATAGC CCTGGCTATC CTGAAACTTA ATCTGTAGAC
  CAGGTTGGCC TTGAATTCAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss39356582	mCV23549118	ABI	CRAMUS_MOUSE	f	SNP	G	T					T		T
ss49447176	NES12601590	PERLEGEN	MM_PANEL2	f	SNP		T	T	T	T	T		T		T	T	T	G	T	G	T
ss147537794	ENSMUSSNP5782201	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T							T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32046183					SNP	G	T	T	T	T	T	T	T	T	T	T	T	G	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49447176	NES12601590	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:34100852 () rs orientation: forward

Symbol	Name	Function Class
Mtdh	metadherin	within coordinates
Tssr131017	transcription start site region 131017	1175 bp downstream
Tssr133963	transcription start site region 133963	1173 bp upstream