rs32048968 SNP Detail

Summary

• ID
  rs32048968
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30730553 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AGGCAGAGCC AGGCAGATCT CTGGAGTTTG AATCCAGCCT CAATATCCAG GTGTCTCATA
  ACCTCTTCTA CCTTCATCTC CTGGGAAATC TGGCGCCCTC TTCTGGCCTC CATAGGCACT
  CTTTCCAAAT GCACAGACAC ATACACTTAA GTGAATTAAA AAAAAAAAAA AAGATTGGAG
  TGCTGGTTCT GCAGTTAAGA GCATGAACTA ACTGCTCTTG CAGAGAACTC AGATTCAGTT
  CCCAATACCT GTGTTGGGTG GTCCCATATC TCTCTCTCTC TCTGTCTCTC TCTAATATAT
  M
  TATATATATA TATATATATA TATTTTTTTT TTTTTTTTTT TGAGACAGAT CTCTCACTGA
  GCCTGGCCTA TTTTTCCCAT AGACTAGCTT GCCATTGTAC CCCCTTCCTC AATGCTCTGC
  CTACAGGTGT GAGCTCCCAC AGCTGGCTCT TTTGTTTGCT TTTTGAGACA AGGTTCCTCT
  GTGTAGCCCT GGCTGTTCTG CAACTCTCTC TGTAGACGAG GCTGCATTCG AACTCCAGAG
  ATCTGCCTGG CTCTGCCTCC CGAGTGCTGG GATTAAAGGC ATGCAATGCC ACTGCCTGGC
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J
ss46099213	mCV22838468	ABI	CRAMUS_MOUSE	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J
rs32048968					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30730553 () rs orientation: forward

Symbol	Name	Function Class
Fxyd5	FXYD domain-containing ion transport regulator 5	1600 bp downstream
Rr644976	regulatory region 644976	190 bp distal
Rr644977	regulatory region 644977	660 bp proximal
Tssr65829	transcription start site region 65829	1725 bp upstream