rs32049550 SNP Detail

Summary

• ID
  rs32049550
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:43426333 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCCC AGGGAGAACC TGCAAGAGTC
  M
  CACCCTCCAG CCGTGCCCTC CAAAC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45601592	mCV23167591	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	C
ss146239129	ENSMUSSNP5441683	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		C
ss321097734	CHEV_4_43439205	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32049550					SNP	A	A	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:43426333 () rs orientation: forward

Symbol	Name	Function Class
Cimip2b	ciliary microtubule inner protein 2B	686 bp downstream
Cpgi14187	CpG island 14187	331 bp distal
Cpgi14188	CpG island 14188	1132 bp proximal
Rr590976	regulatory region 590976	127 bp proximal
Rusc2	RUN and SH3 domain containing 2	within coordinates