rs32050088 SNP Detail

Summary

• ID
  rs32050088
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:164288732 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCAACGTGC TTCCTGCTCT ATGACCTCGG CTAACTCAAG
  TAATGAATAA CTCAAGCACA TAATGTCCCT TTGGAGTGTA CTGGGCTGGG CTTTTGTTCC
  R
  GGGCCCCTTC TGTGAAGGGT GCTGTACCAG CAGGTTGAAA TCGAAATGTG TGTGGTTCTC
  GAGAGGGAGG GGTGCCTCCA GCAGGTGCAG CACACAGCT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45101089	mCV25296143	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32050088					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:164288732 () rs orientation: forward

Symbol	Name	Function Class
Gm32391	predicted gene, 32391	within coordinates
Gm70485	predicted gene, 70485	within coordinates
Rr422218	regulatory region 422218	1927 bp distal
Rr422219	regulatory region 422219	within coordinates
Rr422220	regulatory region 422220	722 bp proximal
Rr422221	regulatory region 422221	876 bp proximal
Tssr14749	transcription start site region 14749	314 bp upstream
Tssr14750	transcription start site region 14750	292 bp upstream