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rs32050403 SNP Detail
Summary
  • ID
    rs32050403
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr1:20988538 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                          CTCTG GCTCCTAAGT AGCTGGGAAT
    R
    TAAGCCTGCA CCAGCAAACC TGGTG                                      
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
ss45100563 mCV24135575 ABI CRAMUS_MOUSE f SNP A G A
ss148726414 ENSMUSSNP4376501 ENSEMBL ENSEMBL_Sanger f SNP A A
ss319654651 CHEV_1_20908395 CHEVERUD SCREENING_POP f SNP G A
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
rs32050403 SNP A A G A G A
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr1:20988538 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Paqr8 progestin and adipoQ receptor family member VIII within coordinates
Rr407023 regulatory region 407023 1644 bp proximal
Tssr6058 transcription start site region 6058 460 bp downstream
Tssr6059 transcription start site region 6059 455 bp downstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory