rs32051377 SNP Detail

Summary

• ID
  rs32051377
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:72653760 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGCCAGAGC CCTTCTCAGT CCGTCTGCTG
  TCCATCCCCT GAAGTCCACA TGGAAATCCA GTGTTTAACT TCATCCAGGA AGGGGACGCA
  GCCATGGACT GGGTGATCAC AGACAAAACC CCACCAGCTG CAAAAACCCT TAGTCCATGA
  R
  GTAATGGTGT TTGCACGGTT AGTCAGATAA GGAGGCTGTG GCTCTGTGGA AGCCCTCTTG
  CTATTGTTAC TTTCAGTCCC TCTCAGGCTA CGTCATGGTT GCTCCATCAG GCCCTAATGG
  CCTGTCTGTC AGGGCTGGCC CTTTGCTCTT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss45100271	mCV22735891	ABI	CRAMUS_MOUSE	f	SNP		A	G					A	G
ss51271124	NES14523202	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	A	A	G		G	A	A		G	A	A	G
ss144660854	ENSMUSSNP553528	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G						G
ss319789905	CHEV_1_72661175	CHEVERUD	SCREENING_POP	f	SNP												G					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs32051377					SNP	A	A	G	G	A	A	G	A	G	A	A	G	G	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51271124	NES14523202	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:72653760 () rs orientation: forward

Symbol	Name	Function Class
Gm70886	predicted gene, 70886	within coordinates
Smarcal1	SNF2 related chromatin remodeling ATPase like 1	within coordinates