rs32051537 SNP Detail

Summary

• ID
  rs32051537
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:94762753 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTATTTATT TGAATATGAA
  AGGTGAGTCA CTAAAATGAC TTACACAAAC CCCACTCTCA GCAATGTCTT GCACATTTTA
  AACAAATAAC CAGTCTAAAC TGGACACTTT TTTCCCATTA GAATCAGCTC CACACTAGGG
  AATGAGGTAC CAAACATTAT AAGCTATATC CCAATCTCAA TTTCTTGCCA CAACAAAATT
  Y
  TGTTTGAGTG ATCCCGAAAT GCAATCATCT GCTTAAGACA AAGGTTTGTT GAAAACAAAA
  CAGCCTGCAA ACAGGCTGTC GGGACAACAT GTAAGGTACC TCCGACCTCT GAAAGTACAA
  CCAGACAACA GAGTGTGTCC TCGCAATTTT AGGTCTACTG GGAGTCTGCA ATGATACTGT
  ATGTTGGCAC TTTGGTAGAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss47620337	NES11417982	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs32051537					SNP	T	T	T	T	T	T	C	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47620337	NES11417982	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:94762753 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20835	CpG island 20835	464 bp proximal
Nudt21	nudix hydrolase 21	within coordinates
Ogfod1	2-oxoglutarate and iron-dependent oxygenase domain containing 1	1073 bp upstream
Rr368582	regulatory region 368582	858 bp upstream
Tssr78816	transcription start site region 78816	1096 bp upstream
Tssr82477	transcription start site region 82477	882 bp downstream
Tssr82478	transcription start site region 82478	910 bp downstream