rs32053599 SNP Detail

Summary

• ID
  rs32053599
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:51509590 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACCC AGCTGTCGCT CGTGTATAAC
  W
  GCACAAAGAA TCCAAGTCAG AATAC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46099800	mCV24989959	ABI	CRAMUS_MOUSE	f	SNP	T	A	A	T	T
ss149257803	ENSMUSSNP2195376	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
ss322204184	CHEV_7_59115212	CHEVERUD	SCREENING_POP	f	SNP						A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32053599					SNP	T	A	A	T	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:51509590 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19159	CpG island 19159	1351 bp proximal
Fancf	Fanconi anemia, complementation group F	735 bp downstream
Gm45235	predicted gene 45235	within coordinates
Tssr2273	transcription start site region 2273	1963 bp upstream