rs32054261 SNP Detail

Summary

• ID
  rs32054261
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:67168534 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTCA GAAAAGGTCA GGCCTCCCAG
  R
  GACTGTCACC AGAAATGGCA TGCCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss45100777	mCV24325962	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A	G
ss144536927	ENSMUSSNP5121240	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		G		A
ss319761652	CHEV_1_67175949	CHEVERUD	SCREENING_POP	f	SNP						G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs32054261					SNP	G	G	G	A	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:67168534 () rs orientation: forward

Symbol	Name	Function Class
Cps1	carbamoyl-phosphate synthetase 1	within coordinates
Tssr7186	transcription start site region 7186	442 bp downstream
Tssr7187	transcription start site region 7187	327 bp downstream
Tssr7188	transcription start site region 7188	223 bp downstream